On Kubuntu, Akonadi is using /usr/sbin/mysqld-akonadi as mysql server. It is symlink to /usr/sbin/mysqld, but in /proc filesystem it is named as mysqld-akonadi...
Akonadi should not expect specific executable name, but should evaluate it from mMysqldPath variable. Moreover, process names in /proc filesystem is trimmed to 15 characters on Linux.