diff --git a/libs/ui/KisWindowLayoutResource.cpp b/libs/ui/KisWindowLayoutResource.cpp
index 68cb27a3d5..11f0bd2890 100644
--- a/libs/ui/KisWindowLayoutResource.cpp
+++ b/libs/ui/KisWindowLayoutResource.cpp
@@ -1,303 +1,308 @@
 /*
  *  Copyright (c) 2018 Jouni Pentikäinen <joupent@gmail.com>
  *
  *  This program is free software; you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation; either version 2 of the License, or
  *  (at your option) any later version.
  *
  *  This program is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
  *  along with this program; if not, write to the Free Software
  *  Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
  */
 #include "KisWindowLayoutResource.h"
 
 #include <QVector>
 #include <QFile>
 #include <QDomDocument>
+#include <QApplication>
+#include <QtCore/QEventLoop>
 
 #include <KisPart.h>
 #include <KisDocument.h>
 #include <kis_dom_utils.h>
 
 static const int WINDOW_LAYOUT_VERSION = 1;
 
 struct KisWindowLayoutResource::Private
 {
     struct Window {
         QUuid windowId;
         QByteArray geometry;
         QByteArray windowState;
     };
 
     QVector<Window> windows;
     bool showImageInAllWindows;
 
     Private() = default;
 
     explicit Private(QVector<Window> windows)
         : windows(std::move(windows))
     {}
 
     QPointer<KisMainWindow> findWindow(QUuid id) {
         const QList<QPointer<KisMainWindow>> &currentWindows = KisPart::instance()->mainWindows();
         Q_FOREACH(QPointer<KisMainWindow> mainWindow, currentWindows) {
             if (mainWindow->id() == id) {
                 return mainWindow;
             }
         }
 
         return QPointer<KisMainWindow>();
     }
 
     void openNecessaryWindows(QList<QPointer<KisMainWindow>> &currentWindows) {
         auto *kisPart = KisPart::instance();
 
         Q_FOREACH(const Window &window, windows) {
             QPointer<KisMainWindow> mainWindow = findWindow(window.windowId);
 
             if (mainWindow.isNull()) {
                 mainWindow = kisPart->createMainWindow(window.windowId);
                 currentWindows.append(mainWindow);
                 mainWindow->show();
             }
         }
     }
 
     void closeUnneededWindows(QList<QPointer<KisMainWindow>> &currentWindows) {
         QVector<QPointer<KisMainWindow>> windowsToClose;
 
         Q_FOREACH(KisMainWindow *mainWindow, currentWindows) {
             bool keep = false;
             Q_FOREACH(const Window &window, windows) {
                 if (window.windowId == mainWindow->id()) {
                     keep = true;
                     break;
                 }
             }
 
             if (!keep) {
                 windowsToClose.append(mainWindow);
             }
         }
 
         migrateViewsFromClosingWindows(windowsToClose);
 
         Q_FOREACH(QPointer<KisMainWindow> mainWindow, windowsToClose) {
             mainWindow->close();
         }
     }
 
     void migrateViewsFromClosingWindows(QVector<QPointer<KisMainWindow>> &closingWindows) const
     {
         auto *kisPart = KisPart::instance();
         KisMainWindow *migrationTarget = nullptr;
 
         Q_FOREACH(KisMainWindow *mainWindow, kisPart->mainWindows()) {
             if (!closingWindows.contains(mainWindow)) {
                 migrationTarget = mainWindow;
                 break;
             }
         }
 
         if (!migrationTarget) {
             qWarning() << "Problem: window layout with no windows would leave user with zero main windows.";
             migrationTarget = closingWindows.takeLast();
             migrationTarget->show();
         }
 
         QVector<KisDocument*> visibleDocuments;
         Q_FOREACH(KisView *view, kisPart->views()) {
             KisMainWindow *window = view->mainWindow();
             if (!closingWindows.contains(window)) {
                 visibleDocuments.append(view->document());
             }
         }
 
         Q_FOREACH(KisDocument *document, kisPart->documents()) {
             if (!visibleDocuments.contains(document)) {
                 visibleDocuments.append(document);
                 migrationTarget->newView(document);
             }
         }
     }
 };
 
 KisWindowLayoutResource::KisWindowLayoutResource(const QString &filename)
     : KoResource(filename)
     , d(new Private)
 {}
 
 KisWindowLayoutResource::~KisWindowLayoutResource()
 {}
 
 KisWindowLayoutResource * KisWindowLayoutResource::fromCurrentWindows(
     const QString &filename, const QList<QPointer<KisMainWindow>> &mainWindows, bool showImageInAllWindows
 )
 {
     auto resource = new KisWindowLayoutResource(filename);
     resource->setWindows(mainWindows);
     resource->setShowImageInAllWindows(showImageInAllWindows);
     return resource;
 }
 
 void KisWindowLayoutResource::applyLayout()
 {
     KisPart *kisPart = KisPart::instance();
     QList<QPointer<KisMainWindow>> currentWindows = kisPart->mainWindows();
 
     d->openNecessaryWindows(currentWindows);
+    d->closeUnneededWindows(currentWindows);
+
+    // Wait for the windows to finish opening / closing before applying saved geometry.
+    // If we don't, the geometry may get reset after we apply it.
+    QApplication::processEvents(QEventLoop::ExcludeUserInputEvents);
 
     Q_FOREACH(const auto &window, d->windows) {
         QPointer<KisMainWindow> mainWindow = d->findWindow(window.windowId);
         KIS_SAFE_ASSERT_RECOVER_BREAK(mainWindow);
 
         mainWindow->restoreGeometry(window.geometry);
         mainWindow->restoreWorkspace(window.windowState);
     }
 
-    d->closeUnneededWindows(currentWindows);
-
     kisPart->setShowImageInAllWindowsEnabled(d->showImageInAllWindows);
 }
 
 bool KisWindowLayoutResource::save()
 {
     if (filename().isEmpty())
         return false;
 
     QFile file(filename());
     file.open(QIODevice::WriteOnly);
     bool res = saveToDevice(&file);
     file.close();
     return res;
 }
 
 bool KisWindowLayoutResource::load()
 {
     if (filename().isEmpty())
          return false;
 
     QFile file(filename());
     if (file.size() == 0) return false;
     if (!file.open(QIODevice::ReadOnly)) {
         warnKrita << "Can't open file " << filename();
         return false;
     }
 
     bool res = loadFromDevice(&file);
     file.close();
     return res;
 }
 
 bool KisWindowLayoutResource::saveToDevice(QIODevice *dev) const
 {
     QDomDocument doc;
     QDomElement root = doc.createElement("WindowLayout");
     root.setAttribute("name", name());
     root.setAttribute("version", WINDOW_LAYOUT_VERSION);
 
     saveXml(doc, root);
 
     doc.appendChild(root);
 
     QTextStream textStream(dev);
     textStream.setCodec("UTF-8");
     doc.save(textStream, 4);
 
     KoResource::saveToDevice(dev);
 
     return true;
 }
 
 bool KisWindowLayoutResource::loadFromDevice(QIODevice *dev)
 {
     QDomDocument doc;
     if (!doc.setContent(dev)) {
         return false;
     }
 
     QDomElement element = doc.documentElement();
     setName(element.attribute("name"));
 
     d->windows.clear();
 
     loadXml(element);
 
     setValid(true);
     return true;
 }
 
 void KisWindowLayoutResource::saveXml(QDomDocument &doc, QDomElement &root) const
 {
     root.setAttribute("showImageInAllWindows", (int)d->showImageInAllWindows);
 
     Q_FOREACH(const auto &window, d->windows) {
         QDomElement elem = doc.createElement("window");
         elem.setAttribute("id", window.windowId.toString());
 
         QDomElement geometry = doc.createElement("geometry");
         geometry.appendChild(doc.createCDATASection(window.geometry.toBase64()));
         elem.appendChild(geometry);
 
         QDomElement state = doc.createElement("windowState");
         state.appendChild(doc.createCDATASection(window.windowState.toBase64()));
         elem.appendChild(state);
         root.appendChild(elem);
     }
 }
 
 void KisWindowLayoutResource::loadXml(const QDomElement &element) const
 {
     d->showImageInAllWindows = KisDomUtils::toInt(element.attribute("showImageInAllWindows", "0"));
 
     for (auto windowElement = element.firstChildElement("window");
          !windowElement.isNull();
          windowElement = windowElement.nextSiblingElement("window")) {
 
         Private::Window window;
 
         window.windowId = QUuid(windowElement.attribute("id", QUuid().toString()));
         if (window.windowId.isNull()) {
             window.windowId = QUuid::createUuid();
         }
 
         QDomElement geometry = windowElement.firstChildElement("geometry");
         QDomElement state = windowElement.firstChildElement("windowState");
 
         window.geometry = QByteArray::fromBase64(geometry.text().toLatin1());
         window.windowState = QByteArray::fromBase64(state.text().toLatin1());
 
         d->windows.append(window);
     }
 }
 
 QString KisWindowLayoutResource::defaultFileExtension() const
 {
     return QString(".kwl");
 }
 
 void KisWindowLayoutResource::setWindows(const QList<QPointer<KisMainWindow>> &mainWindows)
 {
     d->windows.clear();
 
     Q_FOREACH(auto window, mainWindows) {
         Private::Window state;
         state.windowId = window->id();
         state.geometry = window->saveGeometry();
         state.windowState = window->saveState();
 
         d->windows.append(state);
     }
 }
 
 void KisWindowLayoutResource::setShowImageInAllWindows(bool showInAll)
 {
     d->showImageInAllWindows = showInAll;
 }